STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_8605KEGG: rmr:Rmar_0974 hypothetical protein; SPTR: D0MHB0 Putative uncharacterized protein. (330 aa)    
Predicted Functional Partners:
Krac_8604
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR000447:IPR006076; KEGG: rxy:Rxyl_0462 glycine oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Q1AYU2 Glycine oxidase; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO.
       0.773
Krac_8606
KEGG: rca:Rcas_0289 hypothetical protein; SPTR: A7NG35 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3054).
       0.512
Krac_8607
KEGG: sai:Saci_0824 hypothetical protein; SPTR: Q71AF3 Putative uncharacterized protein.
       0.512
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.