STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9339Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: ttr:Tter_2606 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: D1CIC3 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain. (344 aa)    
Predicted Functional Partners:
Krac_8852
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: rrs:RoseRS_1364 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: A5UT11 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
     0.759
Krac_3527
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: bja:blr5436 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: Q4BX27 Oxidoreductase, N-terminal; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.747
Krac_5802
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: rxy:Rxyl_1725 oxidoreductase-like protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: B9XKJ4 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
     0.742
Krac_2996
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR001395:IPR016040:IPR000683:IPR004104; KEGG: ttr:Tter_1474 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; aldo/keto reductase; SPTR: D1CC65 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Aldo/keto reductase family.
  
 
  0.731
Krac_9340
COGs: COG3828 conserved hypothetical protein; KEGG: rrs:RoseRS_3453 hypothetical protein; SPTR: A5UYV8 Putative uncharacterized protein; PFAM: Trehalose utilisation.
 
  
  0.728
Krac_5491
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: gka:GK1898 myo-inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Q5KYQ3 Myo-inositol 2-dehydrogenase; manually curated; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
     0.716
Krac_9338
Protein of unknown function DUF162; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: gsu:GSU1621 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: Q74CQ2 Conserved domain protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
       0.678
Krac_8523
Protein of unknown function DUF1037; COGs: COG4813 Trehalose utilization protein; InterPro IPR009381; KEGG: gyc:GYMC61_2950 protein of unknown function DUF1037; PFAM: protein of unknown function DUF1037; SPTR: A6CLV1 Trehalose utilization protein; PFAM: Trehalose utilisation.
 
    0.674
Krac_4320
Thiamine pyrophosphate protein central region; COGs: COG3962 Acetolactate synthase; InterPro IPR012001:IPR012000:IPR011766:IPR000399; KEGG: rxy:Rxyl_1718 thiamine pyrophosphate enzyme, central region; PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q1AVA0 Thiamine pyrophosphate enzyme, central region; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP [...]
 
  
 0.642
Krac_5490
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: ttr:Tter_0273 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: D1CE39 Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.
  
 
  0.639
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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