STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9850KEGG: hypothetical protein; K10863 aprataxin; SPTR: B5HN86 Putative uncharacterized protein. (233 aa)    
Predicted Functional Partners:
Krac_9849
KEGG: hsl:OE2175F hypothetical protein; SPTR: C1VA16 Putative uncharacterized protein.
      0.777
Krac_9848
Hypothetical protein; KEGG: rxy:Rxyl_0517 major facilitator transporter; SPTR: Q1AYN7 Major facilitator superfamily MFS_1.
       0.773
Krac_2330
Peptidase M75, Imelysin; COGs: COG2822 periplasmic lipoprotein involved in iron transport; InterPro IPR018976:IPR008972; KEGG: pjd:Pjdr2_0995 lipoprotein precursor; PFAM: Peptidase M75, Imelysin; SPTR: C6CVG1 Lipoprotein; PFAM: Imelysin.
  
  
 0.736
Krac_2045
FTR1 family protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; KEGG: aca:ACP_1210 FTR1 family protein; SPTR: B7DMS3 Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
  
  
 0.505
Krac_2332
Iron permease FTR1; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: nml:Namu_4913 iron permease FTR1; PFAM: iron permease FTR1; SPTR: C8X9Y7 Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
  
  
 0.505
Krac_1228
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterProIPR007348:IPR008457:IPR010916:IPR014755:IPR 014756; KEGG: sco:SCO4053 transport integral membrane protein; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CA49 Copper resistance protein CopC; PFAM: Copper resistance protein CopC.
  
  
 0.453
Krac_7870
COGs: COG1276 Putative copper export protein; InterPro IPR014756:IPR007348:IPR008457:IPR014755; KEGG: ttr:Tter_1118 copper resistance protein CopC; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CB68 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
  
 0.453
Krac_8339
COGs: COG1276 Putative copper export protein; InterPro IPR007348:IPR008457:IPR014756:IPR014755; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CA49 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
  
 0.453
Krac_8525
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: A7NME4 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
  
 0.453
Krac_9851
KEGG: app:CAP2UW1_2761 hypothetical protein; SPTR: C7RTA9 Putative uncharacterized protein; PFAM: Dienelactone hydrolase family.
       0.445
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.