STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_9993KEGG: bbe:BBR47_47790 hypothetical protein; SPTR: C0ZKS9 Putative uncharacterized protein. (301 aa)    
Predicted Functional Partners:
Krac_3183
Protein of unknown function DUF2330; COGs: COG4402 conserved hypothetical protein; InterPro IPR019283; KEGG: hau:Haur_0856 hypothetical protein; PFAM: Protein of unknown function DUF2330; SPTR: A9AYC2 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2330).
  
     0.600
Krac_9102
GAF sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR003018:IPR003661:IPR003594:IPR005467:IPR 004358:IPR010916:IPR009082; KEGG: scl:sce1474 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SPTR: A9FC70 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain.
  
     0.576
Krac_4586
COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: scl:sce1419 hypothetical protein; PFAM: peptidase M19 renal dipeptidase; SPTR: Q08YK2 Sphingolipid ceramide N-deacylase; PFAM: Membrane dipeptidase (Peptidase family M19).
  
     0.540
Krac_9067
KEGG: scl:sce4729 hypothetical protein; SPTR: A9FEJ3 Putative membrane protein.
  
     0.521
Krac_1844
KEGG: hau:Haur_1073 hypothetical protein; SPTR: A9B014 Putative uncharacterized protein.
  
     0.510
Krac_2885
COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: scl:sce1419 hypothetical protein; PFAM: peptidase M19 renal dipeptidase; SPTR: Q08YK2 Sphingolipid ceramide N-deacylase; PFAM: Membrane dipeptidase (Peptidase family M19).
  
     0.510
Krac_5852
Hypothetical protein; InterPro IPR016024; KEGG: sgr:SGR_2197 hypothetical protein; SPTR: A1ZDE3 Putative uncharacterized protein.
  
     0.497
Krac_0272
GAF sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003018:IPR003661:IPR003594:IPR005467; KEGG: scl:sce1474 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SPTR: A9FC70 Sensor protein; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.488
Krac_9994
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR009061:IPR011109; KEGG: sti:Sthe_2229 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: D1C6M6 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family.
       0.484
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.