STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmuk_1493Lysozyme; KEGG: ecx:EcHS_A3533 bifunctional chitinase/lysozyme; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII. (481 aa)    
Predicted Functional Partners:
Hmuk_1505
PFAM: Glycoside hydrolase, family 20, catalytic core; PKD domain containing protein; Carbohydrate-binding family V/XII; SMART: PKD domain containing protein; Carbohydrate- binding family V/XII; KEGG: sma:SAV_5268 beta-N-acetylhexosaminidase.
  
  
 
0.922
Hmuk_3174
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tte:TTE0215 beta-glucosidase-related glycosidase.
 
  
 0.921
Hmuk_2983
PFAM: MaoC domain protein dehydratase; KEGG: hma:rrnAC0688 hypothetical protein.
  
    0.451
Hmuk_0295
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hwa:HQ3624A ABC-type cobalt transport system, ATP binding protein.
  
    0.416
gpmI
Phosphoglycerate mutase, 2,3-bisphosphoglycerate- independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
       0.414
Hmuk_0843
PFAM: glycoside hydrolase family 9; KEGG: vha:VIBHAR_03428 hypothetical protein.
  
     0.402
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.