STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbcLRibulose bisphosphate carboxylase, type III; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily. (423 aa)    
Predicted Functional Partners:
Hmuk_1789
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hsl:OE1164R phosphatase-like protein.
 
  
 0.923
Hmuk_1609
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hma:rrnAC1706 3-phosphoglycerate kinase.
 
  
 0.919
Hmuk_2083
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hwa:HQ2788A phosphoglycolate phosphatase.
 
  
 0.918
Hmuk_1809
SPP-like hydrolase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
  0.900
Hmuk_1381
PFAM: transferase hexapeptide repeat containing protein; KEGG: hma:rrnAC3458 anhydrase family 3 protein.
    
 
 0.786
Hmuk_2762
Translation initiation factor, aIF-2BII family; KEGG: hsl:OE3610R ribose-1,5-bisphosphate isomerase (ribulose-bisphosphate forming); TIGRFAM: translation initiation factor, aIF-2BII family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
  
 0.730
fbp
PFAM: Inositol phosphatase/fructose-16- bisphosphatase; KEGG: hma:rrnAC0772 fructose-1,6-bisphosphatase.
 
  
 0.730
Hmuk_2765
PFAM: aminoglycoside phosphotransferase; KEGG: hma:rrnAC0248 phosphotransferase.
       0.596
Hmuk_1330
TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: hsl:OE2749F uridine kinase.
     
 0.557
Hmuk_2767
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hma:rrnAC1984 3-oxoacyl-[acyl-carrier protein] reductase.
       0.537
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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