STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dret_1842KEGG: dal:Dalk_0704 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (618 aa)    
Predicted Functional Partners:
Dret_1841
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_0703 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   0.910
Dret_2110
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.770
Dret_2398
KEGG: dps:DP0331 hypothetical protein.
 
   
 0.722
Dret_0080
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2277 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   0.702
Dret_2397
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1501 binding-protein-dependent transport systems inner membrane component.
 
     0.537
Dret_0173
PFAM: thiamineS protein; KEGG: dma:DMR_26290 hypothetical protein.
 
     0.536
Dret_2093
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dal:Dalk_1983 UBA/ThiF-type NAD/FAD binding protein.
 
     0.472
Dret_0011
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.435
Your Current Organism:
Desulfohalobium retbaense
NCBI taxonomy Id: 485915
Other names: D. retbaense DSM 5692, Desulfohalobium retbaense DSM 5692, Desulfohalobium retbaense str. DSM 5692, Desulfohalobium retbaense strain DSM 5692
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