STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1060PFAM: protein of unknown function DUF881; KEGG: bsu:BSU15250 hypothetical protein. (243 aa)    
Predicted Functional Partners:
Dtox_1062
PFAM: protein of unknown function DUF1290; KEGG: bsu:BSU15270 small basic protein.
 
  
 0.974
Dtox_1061
PFAM: protein of unknown function DUF881; KEGG: bha:BH2562 hypothetical protein.
 
    
0.851
Dtox_1059
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
    0.830
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
       0.653
Dtox_0109
PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: bsu:BSU00400 hypothetical protein.
 
     0.652
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.643
Dtox_0280
KEGG: bsu:BSU01090 putative ribosomal protein L7Ae- like.
  
     0.468
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.464
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.455
murA-2
UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.436
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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