Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dtox_1065 | Dtox_1068 | Dtox_1065 | Dtox_1068 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | 0.937 |
| Dtox_1065 | Dtox_1069 | Dtox_1065 | Dtox_1069 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: bha:BH2552 hypothetical protein. | 0.855 |
| Dtox_1065 | Dtox_1172 | Dtox_1065 | Dtox_1172 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: bar:GBAA4138 hypothetical protein. | 0.778 |
| Dtox_1065 | Dtox_2050 | Dtox_1065 | Dtox_2050 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH1526 stage II sporulation protein M. | 0.794 |
| Dtox_1065 | Dtox_2111 | Dtox_1065 | Dtox_2111 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.800 |
| Dtox_1065 | Dtox_2607 | Dtox_1065 | Dtox_2607 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: stage III sporulation protein AE; KEGG: bar:GBAA4413 stage III sporulation protein AE. | 0.780 |
| Dtox_1065 | Dtox_2608 | Dtox_1065 | Dtox_2608 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: stage III sporulation protein AD; KEGG: bsu:BSU24400 mutants block sporulation after engulfment (stage III sporulation). | 0.767 |
| Dtox_1065 | Dtox_3071 | Dtox_1065 | Dtox_3071 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: bha:BH1360 stage IV sporulation protein. | 0.802 |
| Dtox_1065 | Dtox_3072 | Dtox_1065 | Dtox_3072 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: bha:BH1359 hypothetical protein. | 0.783 |
| Dtox_1065 | gpr | Dtox_1065 | Dtox_1166 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.684 |
| Dtox_1068 | Dtox_1065 | Dtox_1068 | Dtox_1065 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.937 |
| Dtox_1068 | Dtox_1069 | Dtox_1068 | Dtox_1069 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: bha:BH2552 hypothetical protein. | 0.906 |
| Dtox_1068 | Dtox_1172 | Dtox_1068 | Dtox_1172 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: bar:GBAA4138 hypothetical protein. | 0.772 |
| Dtox_1068 | Dtox_2050 | Dtox_1068 | Dtox_2050 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH1526 stage II sporulation protein M. | 0.661 |
| Dtox_1068 | Dtox_2111 | Dtox_1068 | Dtox_2111 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.862 |
| Dtox_1068 | Dtox_2607 | Dtox_1068 | Dtox_2607 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: stage III sporulation protein AE; KEGG: bar:GBAA4413 stage III sporulation protein AE. | 0.795 |
| Dtox_1068 | Dtox_2608 | Dtox_1068 | Dtox_2608 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: stage III sporulation protein AD; KEGG: bsu:BSU24400 mutants block sporulation after engulfment (stage III sporulation). | 0.779 |
| Dtox_1068 | Dtox_3071 | Dtox_1068 | Dtox_3071 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: bha:BH1360 stage IV sporulation protein. | 0.802 |
| Dtox_1068 | Dtox_3072 | Dtox_1068 | Dtox_3072 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: bha:BH1359 hypothetical protein. | 0.740 |
| Dtox_1068 | gpr | Dtox_1068 | Dtox_1166 | TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro- sigma-E. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.768 |
page 1 of 6