Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpin_0844 | Cpin_0845 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA. | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | 0.516 |
Cpin_0844 | Cpin_0846 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA. | Hypothetical protein. | 0.454 |
Cpin_0845 | Cpin_0844 | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA. | 0.516 |
Cpin_0845 | Cpin_0846 | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | Hypothetical protein. | 0.681 |
Cpin_0845 | Cpin_0847 | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ. | 0.524 |
Cpin_0845 | Cpin_2873 | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: scl:sce9123 putative oxidoreductase. | 0.603 |
Cpin_0846 | Cpin_0844 | Hypothetical protein. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA. | 0.454 |
Cpin_0846 | Cpin_0845 | Hypothetical protein. | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | 0.681 |
Cpin_0846 | Cpin_0847 | Hypothetical protein. | PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ. | 0.598 |
Cpin_0847 | Cpin_0845 | PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ. | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | 0.524 |
Cpin_0847 | Cpin_0846 | PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ. | Hypothetical protein. | 0.598 |
Cpin_2873 | Cpin_0845 | PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: scl:sce9123 putative oxidoreductase. | DNA-N1-methyladenine dioxygenase; KEGG: vha:VIBHAR_06700 hypothetical protein. | 0.603 |