STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_2176PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ssn:SSON_1983 cytoplasmic alpha-amylase. (488 aa)    
Predicted Functional Partners:
Cpin_2576
KEGG: noc:Noc_1740 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.936
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.927
Cpin_2573
KEGG: sfu:Sfum_2351 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
 
 0.921
Cpin_5087
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase.
  
 
 0.912
Cpin_3099
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: aba:Acid345_0650 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.906
Cpin_2575
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aba:Acid345_2519 alpha amylase.
    
  0.901
Cpin_5410
KEGG: swp:swp_2453 alpha-glucosidase, putative.
    
 0.901
Cpin_5642
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rlt:Rleg2_1908 alpha amylase catalytic region.
    
  0.901
Cpin_5767
KEGG: xcv:XCV2800 putative alpha-glucosidase.
    
 0.901
Cpin_5769
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rpe:RPE_4865 alpha amylase, catalytic region.
    
  0.901
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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