Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpin_2301 | Cpin_2305 | Hypothetical protein. | Hypothetical protein. | 0.874 |
Cpin_2301 | Cpin_2306 | Hypothetical protein. | PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein. | 0.795 |
Cpin_2301 | Cpin_2307 | Hypothetical protein. | PFAM: PKD domain containing protein. | 0.775 |
Cpin_2301 | Cpin_2308 | Hypothetical protein. | Hypothetical protein. | 0.871 |
Cpin_2301 | Cpin_2309 | Hypothetical protein. | Hypothetical protein. | 0.784 |
Cpin_2301 | Cpin_2310 | Hypothetical protein. | Hypothetical protein. | 0.924 |
Cpin_2301 | Cpin_2311 | Hypothetical protein. | Hypothetical protein; KEGG: DNA-directed RNA polymerase, omega subunit family protein. | 0.777 |
Cpin_2301 | Cpin_2312 | Hypothetical protein. | Hypothetical protein. | 0.784 |
Cpin_2301 | Cpin_4869 | Hypothetical protein. | Hypothetical protein. | 0.874 |
Cpin_2305 | Cpin_2301 | Hypothetical protein. | Hypothetical protein. | 0.874 |
Cpin_2305 | Cpin_2306 | Hypothetical protein. | PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein. | 0.950 |
Cpin_2305 | Cpin_2307 | Hypothetical protein. | PFAM: PKD domain containing protein. | 0.937 |
Cpin_2305 | Cpin_2308 | Hypothetical protein. | Hypothetical protein. | 0.924 |
Cpin_2305 | Cpin_2309 | Hypothetical protein. | Hypothetical protein. | 0.859 |
Cpin_2305 | Cpin_2310 | Hypothetical protein. | Hypothetical protein. | 0.947 |
Cpin_2305 | Cpin_2311 | Hypothetical protein. | Hypothetical protein; KEGG: DNA-directed RNA polymerase, omega subunit family protein. | 0.847 |
Cpin_2305 | Cpin_2312 | Hypothetical protein. | Hypothetical protein. | 0.825 |
Cpin_2305 | Cpin_4873 | Hypothetical protein. | KEGG: hypothetical protein. | 0.874 |
Cpin_2306 | Cpin_2301 | PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein. | Hypothetical protein. | 0.795 |
Cpin_2306 | Cpin_2305 | PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein. | Hypothetical protein. | 0.950 |
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