STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERGIC53ERGIC53, mannose lectin, ER-Golgi intermediate compartment. (355 aa)    
Predicted Functional Partners:
B0DAP0_LACBS
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.829
B0DBJ4_LACBS
Predicted protein.
   
 0.733
B0CUX4_LACBS
Predicted protein.
   
 0.732
B0DXX0_LACBS
ER lumen protein-retaining receptor.
 
 
  
 0.701
B0CRV5_LACBS
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.700
B0CPA1_LACBS
Protein transport protein BET1.
   
 
 0.694
B0DBI9_LACBS
CPII coat sec24 protein.
    
 0.690
B0D8E0_LACBS
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 
 0.684
B0D5Z2_LACBS
Bet1-like protein.
   
 
 0.679
B0CSH6_LACBS
Predicted protein.
 
      0.678
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.