STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DZX2_LACBSSNARE protein YKT6; Belongs to the synaptobrevin family. (199 aa)    
Predicted Functional Partners:
B0CR84_LACBS
SNARE protein SED5/Syntaxin 5.
    
 0.999
B0CPA1_LACBS
Protein transport protein BET1.
    
 0.996
B0CRS3_LACBS
Sly1 vesicle trafficking sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.995
B0CRV5_LACBS
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
0.993
B0CY19_LACBS
Vesicle transport v-snare protein vti1.
    
 0.991
B0D8E0_LACBS
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.991
B0DSV4_LACBS
Vesicle transport v-snare protein vti1.
    
 0.991
B0E004_LACBS
Syntaxin-like protein.
    
 0.988
B0CUY6_LACBS
Predicted protein; Belongs to the syntaxin family.
   
 0.985
B0D5Z2_LACBS
Bet1-like protein.
    
 0.984
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.