STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem160Transmembrane protein 160. (225 aa)    
Predicted Functional Partners:
LOC103134455
Papilin b, proteoglycan-like sulfated glycoprotein.
      
 0.608
adgb
Androglobin; Belongs to the peptidase C2 family.
      
 0.590
sac3d1
Si:zfos-452g4.1.
      
 0.584
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
    0.493
ENSPFOP00000017063
Deoxyhypusine hydroxylase/monooxygenase.
   
  
 0.493
ENSPFOP00000020496
Mitochondrial ribosomal protein L41.
   
    0.491
ENSPFOP00000013080
Minichromosome maintenance complex component 3 associated protein.
      
 0.434
ENSPFOP00000014108
LIM domain containing 2.
      
 0.426
ENSPFOP00000004536
Papilin a, proteoglycan-like sulfated glycoprotein.
      
 0.420
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.