STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001436RIIa domain-containing protein. (60 aa)    
Predicted Functional Partners:
ENSPLAP00000012255
RIIa domain-containing protein.
   
 0.821
ENSPLAP00000025069
Uncharacterized protein.
   
 
 0.808
cep70
Uncharacterized protein.
     
 0.774
catip
Ciliogenesis associated TTC17 interacting protein.
    
 0.701
ropn1l
Rhophilin associated tail protein 1-like.
    
 
 0.683
ENSPLAP00000031401
SPATA6 domain-containing protein.
      
 0.667
LOC106942517
Uncharacterized protein.
   
 
 0.638
ENSPLAP00000006744
Protein kinase domain-containing protein.
   
 0.630
lrrc6
Leucine rich repeat containing 6.
   
 0.620
ENSPLAP00000004647
Uncharacterized protein.
   
 
 0.618
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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