STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955199Spondin domain-containing protein. (593 aa)    
Predicted Functional Partners:
LOC106935614
Uncharacterized protein.
 
      0.828
B3GLCT
Beta 3-glucosyltransferase.
     
 0.653
LOC106950193
Beta 3-glucosyltransferase a.
     
 0.653
ENSPLAP00000010230
Protein O-fucosyltransferase 2.
     
 0.588
LOC106962469
Protein O-fucosyltransferase 2.
     
 0.588
LOC106941507
Uncharacterized protein.
     
 0.588
ENSPLAP00000007200
ADAM_spacer1 domain-containing protein.
     
 0.516
adamtsl4
PLAC domain-containing protein.
     
0.516
APP
Amyloid beta precursor protein.
    
 
 0.491
LOC106940919
Amyloid beta (A4) precursor protein b.
    
 
 0.491
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.