STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_09972Nuclear pore complex protein Nup98-Nup96. (1882 aa)    
Predicted Functional Partners:
Ocin01_03478
Peptidyl-prolyl cis-trans isomerase.
   
 0.999
Ocin01_12857
mRNA export factor.
   
 0.970
Ocin01_14918
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.966
Ocin01_01707
Uncharacterized protein.
   
 0.966
Ocin01_05988
Nuclear pore protein.
   
 0.965
Ocin01_11117
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.964
Ocin01_05816
Uncharacterized protein.
   
 0.963
Ocin01_05049
Uncharacterized protein.
   
 0.963
Ocin01_17159
Nucleoporin Nup43.
    
 0.961
Ocin01_13553
Uncharacterized protein.
   
 0.961
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.