STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE40020.1bioY family protein. (199 aa)    
Predicted Functional Partners:
ADE39406.1
Biotin biosynthesis protein BioY.
  
  
 
0.910
ADE40017.1
Acetyl CoA carboxylase, biotin carboxylase subunit.
 
     0.751
ADE40016.1
Biotin/lipoyl attachment; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.704
ADE40018.1
Allophanate hydrolase subunit 1.
       0.689
ADE40019.1
Putative urea amidolyase related protein.
       0.689
ADE40015.1
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.597
ADE40013.1
ABC transporter related protein.
       0.548
ADE40014.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.548
ADE38803.1
Cobyrinic acid a,c-diamide synthase.
  
  
 0.465
ADE40012.1
Putative ABC transporter, substrate binding protein.
       0.461
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.