STRINGSTRING
SPAC1565.05.1 protein (Schizosaccharomyces pombe) - STRING interaction network
"SPAC1565.05.1" - Uncharacterized protein C1565.05 in Schizosaccharomyces pombe
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAC1565.05.1Uncharacterized protein C1565.05; t-UTP complex subint Utp8 (predicted) (773 aa)    
Predicted Functional Partners:
utp22
U3 small nucleolar RNA-associated protein 22; Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (1097 aa)
     
 
    0.846
SPCC1672.07.1
U3 small nucleolar RNA-associated protein 21 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (902 aa)
     
 
    0.839
utp5
U3 small nucleolar RNA-associated protein 5; Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs) (By similarity) (666 aa)
     
 
    0.819
SPAC19B12.01.1
TPR repeat protein, TTC27 family (817 aa)
     
        0.814
imp4
U3 small nucleolar ribonucleoprotein protein imp4; Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity) (289 aa)
     
 
    0.809
SPAC2E1P5.05.1
Uncharacterized WD repeat-containing protein C2E1P5.05; U3 snoRNP-associated protein Rrp9 (predicted) (524 aa)
     
 
    0.808
SPAPB1A10.06c.1
ATP-dependent RNA helicase Dhr1 (predicted); Belongs to the DEAD box helicase family. DEAH subfamily (1183 aa)
     
 
    0.807
SPBC3D6.12
Uncharacterized WD repeat-containing protein C3D6.12; U3 snoRNA associated protein Dip2 (predicted); Belongs to the WD repeat WDR3/UTP12 family (922 aa)
     
 
    0.807
utp7
Probable U3 small nucleolar RNA-associated protein 7; Involved in nucleolar processing of pre-18S ribosomal RNA (520 aa)
     
 
    0.807
utp4
U3 small nucleolar RNA-associated protein 4; Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs) (By similarity) (710 aa)
     
 
    0.798
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 4896
Other names: CBS 356, CCRC 21461, DBVPG 6277, JCM 8274, MUCL 30245, NRRL Y-12796, S. pombe, Schizosaccharomyces malidevorans, Schizosaccharomyces pombe, fission yeast
Server load: low (22%) [HD]