STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPCC777.17c.1Mitochondrial ribosomal protein subunit L9 (predicted) (101 aa)    
Predicted Functional Partners:
img1
Mitochondrial ribosomal protein subunit L19 (predicted)
   
 0.996
mrpl8
Mitochondrial ribosomal protein subunit L8 (predicted); Belongs to the bacterial ribosomal protein bL17 family
  
 0.996
yml6
Mitochondrial ribosomal protein subunit Yml6 (predicted); Belongs to the universal ribosomal protein uL4 family
   
 0.996
mrpl9
Mitochondrial ribosomal protein subunit L9 (predicted); Belongs to the universal ribosomal protein uL3 family
   
 0.995
mrp7
Putative mitochondrial ribosomal protein subunit l27; Involved in mitochondrial genome encoded proteins translation
   
 0.995
mrpl19
Mitochondrial ribosomal protein subunit L19 (predicted); Belongs to the universal ribosomal protein uL11 family
  
 0.994
mrpl10
Mitochondrial ribosomal protein subunit L15 (predicted); Belongs to the universal ribosomal protein uL15 family
   
 0.994
mrp17
Mitochondrial ribosomal protein subunit Mrp17 (predicted); Belongs to the bacterial ribosomal protein bS6 family
  
 
 0.993
mrpl23
Mitochondrial ribosomal protein subunit L13 (predicted); Belongs to the universal ribosomal protein uL13 family
   
 0.992
mrpl24
Mitochondrial ribosomal protein subunit L28 (predicted)
  
 0.990
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 4896
Other names: CBS 356, CCRC 21461, DBVPG 6277, JCM 8274, MUCL 30245, NRRL Y-12796, S. pombe, Schizosaccharomyces malidevorans, fission yeast
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