STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI13280.1Cytochrome c domain-containing protein. (244 aa)    
Predicted Functional Partners:
SSCI11740.1
Probable NADH dehydrogenase (Ubiquinone) 78K chain.
   
 0.999
SSCI51420.1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.999
SSCI19680.1
Uncharacterized protein.
   
 0.999
SSCI55870.1
Rieske domain-containing protein.
 
 0.999
SSCI78120.1
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.999
SSCI82770.1
Uncharacterized protein.
   
 0.999
SSCI50240.1
Uncharacterized protein.
   
 0.999
SSCI17340.1
Probable COX4-cytochrome-c oxidase chain IV.
   
 0.999
SSCI44550.1
Probable MAS1-mitochondrial processing peptidase beta chain; Belongs to the peptidase M16 family.
   
 0.999
SSCI47640.1
Probable NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.
   
 0.999
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.