STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI31950.1Zn(2)-C6 fungal-type domain-containing protein. (926 aa)    
Predicted Functional Partners:
SSCI16720.1
Probable GTPase Rho1.
   
 0.815
SSCI10200.1
GTP binding protein Rac1.
   
 0.815
SSCI25440.1
GTP binding protein Cdc42.
   
 0.815
SSCI44880.1
Probable Rho2-GTP binding protein Rho2.
   
 0.815
SSCI66420.1
Uncharacterized protein.
   
 0.815
SSCI60230.1
Probable GTP-binding protein Rab11.
   
 0.774
SSCI18070.1
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
    
 0.735
SSCI78230.1
DUF1713 domain-containing protein.
   
 0.728
SSCI37420.1
Probable ARL1-ADP-ribosylation factor.
   
 0.724
SSCI85530.1
Uncharacterized protein.
   
 0.724
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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