STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI14440.1Related to cystathionine beta-lyase. (457 aa)    
Predicted Functional Partners:
SSCI45500.1
Probable cysteine synthase.
 
 0.957
SSCI23790.1
Related to cysteine synthase.
 
 0.957
SSCI52210.1
Probable MET6-methionine synthase.
  
 
 0.955
SSCI54730.1
Related to CYS4-cystathionine beta-synthase.
 
 0.949
SSCI27100.1
Probable STR2-Cystathionine gamma-synthase.
   
 
 0.940
SSCI71410.1
Probable sulfite reductase cys-4.
  
 
 0.927
SSCI84070.1
Related to 3-mercaptopyruvate sulfurtransferase.
  
 
 0.920
SSCI56350.1
Uncharacterized protein.
 
 
 
0.920
SSCI79150.1
Hcy-binding domain-containing protein.
  
 
 0.917
SSCI77970.1
Probable THR1-homoserine kinase.
  
 
 0.915
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.