STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI44360.1RING-type domain-containing protein. (1048 aa)    
Predicted Functional Partners:
SSCI10550.1
Uncharacterized protein.
    
 0.837
SSCI64580.1
Probable KEX2-endoproteinase of late golgi compartment; Belongs to the peptidase S8 family.
    
  0.825
SSCI79650.1
Ubiquitin-like domain-containing protein.
    
 0.765
SSCI49340.1
RRN7-type domain-containing protein.
    
 0.765
SSCI31580.1
Probable ubiquitin.
    
 0.721
SSCI70680.1
Uncharacterized protein.
    
 0.721
SSCI31900.1
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
 0.721
SSCI80700.1
Probable UBC1-E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.715
SSCI19180.1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.674
SSCI13570.1
Probable ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.674
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.