STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI12300.1Uncharacterized protein. (96 aa)    
Predicted Functional Partners:
SSCI45640.1
Uncharacterized protein.
    
 0.880
SSCI13570.1
Probable ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.851
SSCI32330.1
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
   
 0.843
SSCI02720.1
RGS domain-containing protein.
    
 0.805
SSCI67780.1
Uncharacterized protein.
    
 0.783
SSCI51480.1
MHYT domain-containing protein.
    
 0.768
SSCI22390.1
Uncharacterized protein.
    
 0.761
SSCI11800.1
PPM-type phosphatase domain-containing protein.
    
 0.751
SSCI32660.1
Related to phosphoprotein phosphatase 2C.
    
 0.751
SSCI71040.1
Related to PTC3-ser/thr protein phosphatase PP2C.
    
 0.751
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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