STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI78710.1Uncharacterized protein. (842 aa)    
Predicted Functional Partners:
SSCI67690.1
Uncharacterized protein.
    
 0.875
SSCI58000.1
Uncharacterized protein.
   
 0.827
SSCI86990.1
Uncharacterized protein.
    
 0.820
SSCI15270.1
B30.2/SPRY domain-containing protein.
    
 0.746
SSCI43370.1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.722
SSCI64340.1
Uncharacterized protein.
    
 0.721
SSCI42830.1
Probable SEC13-protein transport protein; Belongs to the WD repeat SEC13 family.
    
 0.706
SSCI10980.1
Related to APG1-essential for autophagocytosis.
    
 0.703
SSCI63680.1
Related to nuclear pore complex protein Nup160.
    
 0.695
SSCI03230.1
Uncharacterized protein.
    
 0.691
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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