STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI04940.1Uncharacterized protein. (986 aa)    
Predicted Functional Partners:
SSCI58000.1
Uncharacterized protein.
    
 0.577
SSCI32330.1
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.547
SSCI49590.1
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.541
SSCI46650.1
Related to integral peroxisomal membrane protein.
    
 0.523
SSCI27930.1
Related to transcription factor TFIIIC subunit.
    
 0.514
SSCI67690.1
Uncharacterized protein.
    
 0.512
SSCI26860.1
Uncharacterized protein.
    
  0.508
SSCI32470.1
Uncharacterized protein.
    
 0.507
SSCI35490.1
Probable RPN11-26S proteasome regulatory subunit.
    
  0.503
SSCI22790.1
MRG domain-containing protein.
    
 0.487
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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