STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG81524.1Iron complex outermembrane recepter protein. (815 aa)    
Predicted Functional Partners:
SHG77097.1
TonB-dependent Receptor Plug Domain.
  
 
 0.791
SHG81552.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.773
SHG65920.1
Iron complex outermembrane recepter protein.
  
  
  0.633
SHG48693.1
FecR family protein.
 
  
 0.629
SHG94565.1
FecR family protein.
 
  
 0.607
SHG81492.1
Subtilase family protein.
 
     0.588
SHG49634.1
Protein TonB.
  
   0.578
SHG77348.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.570
SHH06469.1
Protein TonB.
  
   0.565
SHH20935.1
Thrombospondin type 3 repeat-containing protein.
  
     0.528
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.