STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH98348.1Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family. (540 aa)    
Predicted Functional Partners:
SDI09921.1
Hypothetical protein.
  
     0.733
SDI16816.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.728
SDJ01787.1
Hypothetical protein.
  
     0.726
SDI19065.1
Hypothetical protein.
  
     0.717
SDI52736.1
Hypothetical protein.
  
     0.704
SDI67030.1
Tetratricopeptide repeat-containing protein.
  
     0.681
SDI16874.1
Hypothetical protein.
  
     0.669
SDI13538.1
Hypothetical protein.
  
     0.665
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
     
 0.657
SDI16843.1
TadE-like protein.
  
     0.655
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.