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rpl18 protein (Desulfurococcus kamchatkensis) - STRING interaction network
"rpl18" - 50S ribosomal protein L18 in Desulfurococcus kamchatkensis
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rpl1850S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (196 aa)    
Predicted Functional Partners:
rpl30
annotation not available (162 aa)
 
 
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (152 aa)
 
 
  0.999
rpl22
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (157 aa)
   
 
  0.999
DKAM_1158
annotation not available (123 aa)
 
 
  0.999
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (239 aa)
 
 
  0.999
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (155 aa)
 
 
  0.999
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (87 aa)
   
 
  0.999
rpl24
50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit (133 aa)
 
 
  0.999
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (396 aa)
 
 
  0.999
rpl5
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (189 aa)
 
 
  0.999
Your Current Organism:
Desulfurococcus kamchatkensis
NCBI taxonomy Id: 490899
Other names: D. kamchatkensis 1221n, Desulfurococcus kamchatkensis, Desulfurococcus kamchatkensis 1221n, Desulfurococcus kamchatkensis str. 1221n, Desulfurococcus kamchatkensis strain 1221n
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