STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOH78_1095Ribos_L4_asso_C domain-containing protein. (352 aa)    
Predicted Functional Partners:
BOH78_3872
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
BOH78_0167
60S ribosomal protein L9-A.
  
 0.999
BOH78_2134
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
BOH78_3158
Ribosomal_L18e/L15P domain-containing protein.
  
 0.999
BOH78_1982
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
BOH78_3619
60S ribosomal protein L5.
  
 0.999
BOH78_4471
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
C5L36_0B06920
Ubiquitin-40S ribosomal protein S27a.
   
 0.999
BOH78_3544
Ribosomal protein S10.
  
 0.999
BOH78_0861
60S ribosomal protein L31.
   
 0.999
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.