STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOH78_1151Serine/threonine-protein kinase RIO2. (425 aa)    
Predicted Functional Partners:
BOH78_4471
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.999
BOH78_1179
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
C5L36_0B07380
Uncharacterized protein.
   
 0.999
BOH78_1346
Pre-rRNA-processing protein PNO1.
   
 0.998
C5L36_0B12420
Bms1-type G domain-containing protein.
   
 0.998
BOH78_1164
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.997
BOH78_3544
Ribosomal protein S10.
   
 0.996
C5L36_0C02070
Uncharacterized protein.
   
 0.996
BOH78_3556
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.995
BOH78_2215
40S ribosomal protein; Belongs to the universal ribosomal protein uS7 family.
    
 0.995
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.