STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5L36_0D01810VPS28 C-terminal domain-containing protein; Belongs to the VPS28 family. (211 aa)    
Predicted Functional Partners:
C5L36_0C00960
GLUE N-terminal domain-containing protein.
    
 0.992
C5L36_0A09010
Uncharacterized protein.
   
 0.977
C5L36_0C10100
Uncharacterized protein.
    
   0.946
C5L36_0C05170
Uncharacterized protein.
   
 0.930
C5L36_0A09480
Uncharacterized protein.
   
 0.901
BOH78_1121
Vacuolar protein-sorting-associated protein 24.
   
 0.876
C5L36_0A03000
Uncharacterized protein.
   
 0.875
C5L36_0C11210
Uncharacterized protein.
    
 0.864
C5L36_0B03610
Uncharacterized protein.
     
 0.857
C5L36_0B02750
Uncharacterized protein.
     
 0.797
Your Current Organism:
Pichia kudriavzevii
NCBI taxonomy Id: 4909
Other names: AJ 4457 [[Candida krusei]], ATCC 24210, ATCC 6258 [[Candida krusei]], ATCC 749 [[Candida krusei]], CBS 5147, CBS 5147 T, CBS 573 [[Candida krusei]], Candida acidothermophilum, Candida krusei, DBVPG 7230 [[Candida krusei]], IAM 12186 [[Candida krusei]], Issatchenkia orientalis, NRRL Y-413 [[Candida krusei]], NRRL Y-5396, NRRL Y-7179 [[Candida krusei]], P. kudriavzevii, Saccharomyces krusei, Saccharomyces sp. p1
Server load: low (12%) [HD]