Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIQ01292.1 | SIQ11834.1 | SAMN05421647_101898 | SAMN05421647_102273 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Na+/proline symporter. | 0.713 |
| SIQ01292.1 | SIQ13509.1 | SAMN05421647_101898 | SAMN05421647_102373 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.744 |
| SIQ01292.1 | SIQ15821.1 | SAMN05421647_101898 | SAMN05421647_102497 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.499 |
| SIQ01292.1 | SIQ37550.1 | SAMN05421647_101898 | SAMN05421647_104107 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.740 |
| SIQ01292.1 | SIQ68342.1 | SAMN05421647_101898 | SAMN05421647_107185 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.732 |
| SIQ01292.1 | SIQ68360.1 | SAMN05421647_101898 | SAMN05421647_107186 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.732 |
| SIQ01292.1 | SIQ83129.1 | SAMN05421647_101898 | SAMN05421647_109207 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD. | 0.863 |
| SIQ01292.1 | SIQ91163.1 | SAMN05421647_101898 | SAMN05421647_11143 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.740 |
| SIQ11834.1 | SIQ01292.1 | SAMN05421647_102273 | SAMN05421647_101898 | Na+/proline symporter. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.713 |
| SIQ11834.1 | SIQ13509.1 | SAMN05421647_102273 | SAMN05421647_102373 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.983 |
| SIQ11834.1 | SIQ15821.1 | SAMN05421647_102273 | SAMN05421647_102497 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.955 |
| SIQ11834.1 | SIQ37550.1 | SAMN05421647_102273 | SAMN05421647_104107 | Na+/proline symporter. | Signal transduction histidine kinase. | 0.966 |
| SIQ11834.1 | SIQ68342.1 | SAMN05421647_102273 | SAMN05421647_107185 | Na+/proline symporter. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.962 |
| SIQ11834.1 | SIQ68360.1 | SAMN05421647_102273 | SAMN05421647_107186 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.962 |
| SIQ11834.1 | SIQ83129.1 | SAMN05421647_102273 | SAMN05421647_109207 | Na+/proline symporter. | Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD. | 0.839 |
| SIQ11834.1 | SIQ91163.1 | SAMN05421647_102273 | SAMN05421647_11143 | Na+/proline symporter. | PAS domain S-box-containing protein. | 0.955 |
| SIQ13509.1 | SIQ01292.1 | SAMN05421647_102373 | SAMN05421647_101898 | PAS domain S-box-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.744 |
| SIQ13509.1 | SIQ11834.1 | SAMN05421647_102373 | SAMN05421647_102273 | PAS domain S-box-containing protein. | Na+/proline symporter. | 0.983 |
| SIQ13509.1 | SIQ15821.1 | SAMN05421647_102373 | SAMN05421647_102497 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
| SIQ13509.1 | SIQ37550.1 | SAMN05421647_102373 | SAMN05421647_104107 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
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