Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aflv_1849 | spoIIE | Aflv_1849 | Aflv_0057 | Uncharacterized protein conserved in bacteria. | Stage II sporulation protein E (serine phosphatase). | 0.766 |
Aflv_1849 | spoIIGA | Aflv_1849 | Aflv_1822 | Uncharacterized protein conserved in bacteria. | Stage II sporulation protein G (protease). | 0.795 |
Aflv_1849 | spoIIIAE | Aflv_1849 | Aflv_0936 | Uncharacterized protein conserved in bacteria. | Stage III sporulation protein AE (mutants block sporulation after engulfment). | 0.780 |
Aflv_1849 | spoIIIAG | Aflv_1849 | Aflv_0938 | Uncharacterized protein conserved in bacteria. | Stage III sporulation protein AG (mutants block sporulation after engulfment). | 0.766 |
Aflv_1849 | spoIIID | Aflv_1849 | Aflv_2684 | Uncharacterized protein conserved in bacteria. | Stage III sporulation protein D (predicted transcriptional regulator of sigma-E/sigma-K-dependent genes). | 0.775 |
Aflv_1849 | spoIIP | Aflv_1849 | Aflv_0829 | Uncharacterized protein conserved in bacteria. | Stage II sporulation protein P. | 0.742 |
Aflv_1849 | spoIIR | Aflv_1849 | Aflv_2720 | Uncharacterized protein conserved in bacteria. | Stage II sporulation protein R; Required for processing of pro-sigma-E (extracellular signal interacting with SpoIIGA). | 0.801 |
Aflv_1849 | yabQ | Aflv_1849 | Aflv_0054 | Uncharacterized protein conserved in bacteria. | Membrane protein involved in spore cortex formation. | 0.595 |
Aflv_1849 | yabS | Aflv_1849 | Aflv_0058 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | 0.513 |
Aflv_1849 | yabT | Aflv_1849 | Aflv_0059 | Uncharacterized protein conserved in bacteria. | Serine/threonine protein kinase. | 0.427 |
spoIIE | Aflv_1849 | Aflv_0057 | Aflv_1849 | Stage II sporulation protein E (serine phosphatase). | Uncharacterized protein conserved in bacteria. | 0.766 |
spoIIE | spoIIGA | Aflv_0057 | Aflv_1822 | Stage II sporulation protein E (serine phosphatase). | Stage II sporulation protein G (protease). | 0.924 |
spoIIE | spoIIIAE | Aflv_0057 | Aflv_0936 | Stage II sporulation protein E (serine phosphatase). | Stage III sporulation protein AE (mutants block sporulation after engulfment). | 0.770 |
spoIIE | spoIIIAG | Aflv_0057 | Aflv_0938 | Stage II sporulation protein E (serine phosphatase). | Stage III sporulation protein AG (mutants block sporulation after engulfment). | 0.798 |
spoIIE | spoIIID | Aflv_0057 | Aflv_2684 | Stage II sporulation protein E (serine phosphatase). | Stage III sporulation protein D (predicted transcriptional regulator of sigma-E/sigma-K-dependent genes). | 0.774 |
spoIIE | spoIIP | Aflv_0057 | Aflv_0829 | Stage II sporulation protein E (serine phosphatase). | Stage II sporulation protein P. | 0.809 |
spoIIE | spoIIR | Aflv_0057 | Aflv_2720 | Stage II sporulation protein E (serine phosphatase). | Stage II sporulation protein R; Required for processing of pro-sigma-E (extracellular signal interacting with SpoIIGA). | 0.818 |
spoIIE | yabQ | Aflv_0057 | Aflv_0054 | Stage II sporulation protein E (serine phosphatase). | Membrane protein involved in spore cortex formation. | 0.783 |
spoIIE | yabS | Aflv_0057 | Aflv_0058 | Stage II sporulation protein E (serine phosphatase). | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. | 0.944 |
spoIIE | yabT | Aflv_0057 | Aflv_0059 | Stage II sporulation protein E (serine phosphatase). | Serine/threonine protein kinase. | 0.935 |
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