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rnc protein (Rhizobium etli CIAT652) - STRING interaction network
"rnc" - Ribonuclease III in Rhizobium etli CIAT652
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rncRibonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (239 aa)    
Predicted Functional Partners:
sipS
Signal peptidase I protein (247 aa)
 
   
  0.914
era
GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (313 aa)
   
   
  0.902
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (178 aa)
 
 
  0.829
rpmB
50S ribosomal protein L28 (99 aa)
   
 
  0.791
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (610 aa)
 
 
  0.756
rne
Ribonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (960 aa)
   
 
  0.743
polA
DNA polymerase I (997 aa)
 
   
  0.737
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (256 aa)
 
   
  0.735
rpsB
30S ribosomal protein S2 (255 aa)
   
 
  0.733
acpS
4’-phosphopantetheinyl transferase; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (134 aa)
   
   
  0.694
Your Current Organism:
Rhizobium etli CIAT652
NCBI taxonomy Id: 491916
Other names: R. etli CIAT 652, Rhizobium etli CIAT 652, Rhizobium etli CIAT652, Rhizobium etli str. CIAT 652, Rhizobium etli strain CIAT 652
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