STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (470 aa)    
Predicted Functional Partners:
GCV1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 0.995
GCV2
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.990
PICST_73792
Tetrahydrofolate dehydrogenase/cyclohydrolase.
  
 0.988
ADE3
Tetrahydrofolate synthase.
  
 0.986
PUR92
Bifunctional purine biosynthesis protein ADE17.
  
 0.986
GCV3
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 
 0.985
PUR3
Phosphoribosylglycinamide formyltransferase.
  
 0.985
TRP5
Tryptophan synthase.
 
 
 
 0.982
GLY2
Threonine aldolase.
   
 0.982
PICST_44075
Aminotran_5 domain-containing protein.
  
 0.981
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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