STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_71285UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (220 aa)    
Predicted Functional Partners:
PICST_73878
Uncharacterized protein.
   
 0.996
RSP27
Ubiquitin/40S ribosomal protein S27a fusion.
   
 0.983
PICST_69865
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.972
UFD4
Ubiquitin--protein ligase.
   
 0.968
RRN7
RNA polymerase I specific transcription initiation factor RRN7.
   
 0.915
PICST_44575
Ubiquitin-like domain-containing protein.
   
 0.915
MMS2
Ubiquitin-conjugating enzyme variant MMS2 (UEV MMS2).
   
0.912
ATL2
Putative RING-H2 finger protein.
   
 0.847
PICST_56381
Ubiquitin-like domain-containing protein.
   
 0.829
PICST_68363
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
0.814
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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