STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_63766Oligopeptide transporter. (782 aa)    
Predicted Functional Partners:
BIO4
Dethiobiotin synthetase.
      
 0.513
BIO2
Biotin synthase.
      
 0.510
BIO3
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.509
ITR2
Myo-inositol transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.505
GAP1.2
General amino acid permease.
      
 0.503
GAP1.7
General amino acid permease.
   
  
 0.503
GAP1.3
General amino acid permease.
   
  
 0.503
GAP1.8
General amino acid permease.
   
  
 0.503
GAP1.5
General amino acid permease.
      
 0.503
GAP1.1
General amino acid permease.
      
 0.503
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.