STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRL37Ribosomal protein L54/L37-like protein. (107 aa)    
Predicted Functional Partners:
PICST_28237
Uncharacterized protein.
   
 
 0.980
PICST_79554
60S ribosomal protein L17, mitochondrial.
   
 
 0.958
PICST_62940
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.956
PICST_60011
Uncharacterized protein.
   
   0.952
RSM24
37S ribosomal protein S24, mitochondrial; Involved in mitochondrial genome encoded proteins translation; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
   
 
 0.952
MRP17
Mitochondrial ribosomal protein.
   
 
 0.952
PICST_71341
Uncharacterized protein.
   
 
 0.951
MRP10
Ribosomal protein L15/L10-like protein.
   
 
 0.949
MRPL4
54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.
   
 
 0.947
MRP7
Mitochondrial large ribosomal subunit.
   
 
 0.942
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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