STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGUG_02265Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (507 aa)    
Predicted Functional Partners:
PGUG_01977
Uncharacterized protein.
    
 0.949
PGUG_05736
Uncharacterized protein.
   
 0.948
PGUG_01559
MRG domain-containing protein.
   
 0.923
PGUG_05737
HDAC_interact domain-containing protein.
   
 0.886
PGUG_00253
PHD-type domain-containing protein.
   
 
 0.860
PGUG_00243
SAP30_Sin3_bdg domain-containing protein.
    
 0.849
PGUG_03879
Uncharacterized protein.
  
 
 
0.843
PGUG_02761
Uncharacterized protein.
    
 0.841
PGUG_03793
Uncharacterized protein.
   
 0.837
PGUG_00174
PHD domain-containing protein.
    
 0.817
Your Current Organism:
Meyerozyma guilliermondii
NCBI taxonomy Id: 294746
Other names: M. guilliermondii ATCC 6260, Meyerozyma guilliermondii ATCC 6260, Pichia guilliermondii ATCC 6260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.