Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCR2 | YDL022C-A | YLR361C | YDL022C-A | Protein phosphatase; involved in downregulation of the unfolded protein response (UPR), at least in part through dephosphorylation of Ire1p; dosage-dependent positive regulator of the G1/S phase transition through control of the timing of START; physically interacts with, dephosphorylates and destabilizes Sic1p; SWAT-GFP and mCherry fusion proteins localize to the vacuole. | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | 0.416 |
YDL022C-A | DCR2 | YDL022C-A | YLR361C | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | Protein phosphatase; involved in downregulation of the unfolded protein response (UPR), at least in part through dephosphorylation of Ire1p; dosage-dependent positive regulator of the G1/S phase transition through control of the timing of START; physically interacts with, dephosphorylates and destabilizes Sic1p; SWAT-GFP and mCherry fusion proteins localize to the vacuole. | 0.416 |
YDL022C-A | YDR169C-A | YDL022C-A | YDR169C-A | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | Uncharacterized protein YDR169C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.851 |
YDL022C-A | YDR182W-A | YDL022C-A | YDR182W-A | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | Uncharacterized protein YDR182W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.843 |
YDR169C-A | YDL022C-A | YDR169C-A | YDL022C-A | Uncharacterized protein YDR169C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | 0.851 |
YDR169C-A | YDR182W-A | YDR169C-A | YDR182W-A | Uncharacterized protein YDR169C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | Uncharacterized protein YDR182W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.946 |
YDR182W-A | YDL022C-A | YDR182W-A | YDL022C-A | Uncharacterized protein YDR182W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | Uncharacterized protein YDL022C-A; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data. | 0.843 |
YDR182W-A | YDR169C-A | YDR182W-A | YDR169C-A | Uncharacterized protein YDR182W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | Uncharacterized protein YDR169C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.946 |