Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
YDR278C | YDR445C | Uncharacterized protein YDR278C; Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene. | Putative uncharacterized protein YDR445C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data. | 0.471 |
YDR278C | YNL042W-B | Uncharacterized protein YDR278C; Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene. | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | 0.435 |
YDR445C | YDR278C | Putative uncharacterized protein YDR445C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data. | Uncharacterized protein YDR278C; Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene. | 0.471 |
YDR445C | YNL042W-B | Putative uncharacterized protein YDR445C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data. | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | 0.455 |
YMR247W-A | YNL042W-B | Uncharacterized protein YMR247W-A; Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole. | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | 0.446 |
YNL042W-B | YDR278C | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | Uncharacterized protein YDR278C; Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene. | 0.435 |
YNL042W-B | YDR445C | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | Putative uncharacterized protein YDR445C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data. | 0.455 |
YNL042W-B | YMR247W-A | Uncharacterized protein YNL042W-B; Putative protein of unknown function. | Uncharacterized protein YMR247W-A; Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole. | 0.446 |