Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCR2 | YNL193W | YNL199C | YNL193W | Transcriptional activator of genes involved in glycolysis; interacts and functions with the DNA-binding protein Gcr1p. | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | 0.698 |
GRH1 | YNL193W | YDR517W | YNL193W | GRASP65 homolog protein 1; Acetylated cis-Golgi protein, involved in ER to Golgi transport; homolog of human GRASP65; forms a complex with the coiled-coil protein Bug1p; mutants are compromised for the fusion of ER-derived vesicles with Golgi membranes; protein abundance increases in response to DNA replication stress. | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | 0.513 |
WHI3 | YNL193W | YNL197C | YNL193W | RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci; regulates genes involved in the cell cycle, sister chromatid cohesion, and stress response; acts as a cytoplasmic retention factor for Cdc28p and associated cyclins; regulates cell fate and dose-dependently regulates the critical cell size required for passage through Start; Tpk1p (PKA) mediated phosphorylation (S568) inhibits Whi3p function, decreasing its interaction with CLN3 mRNA; regulates ploidy. | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | 0.692 |
YNL193W | GCR2 | YNL193W | YNL199C | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | Transcriptional activator of genes involved in glycolysis; interacts and functions with the DNA-binding protein Gcr1p. | 0.698 |
YNL193W | GRH1 | YNL193W | YDR517W | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | GRASP65 homolog protein 1; Acetylated cis-Golgi protein, involved in ER to Golgi transport; homolog of human GRASP65; forms a complex with the coiled-coil protein Bug1p; mutants are compromised for the fusion of ER-derived vesicles with Golgi membranes; protein abundance increases in response to DNA replication stress. | 0.513 |
YNL193W | WHI3 | YNL193W | YNL197C | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci; regulates genes involved in the cell cycle, sister chromatid cohesion, and stress response; acts as a cytoplasmic retention factor for Cdc28p and associated cyclins; regulates cell fate and dose-dependently regulates the critical cell size required for passage through Start; Tpk1p (PKA) mediated phosphorylation (S568) inhibits Whi3p function, decreasing its interaction with CLN3 mRNA; regulates ploidy. | 0.692 |
YNL193W | YPL247C | YNL193W | YPL247C | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | WD repeat-containing protein YPL247C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest. | 0.559 |
YPL247C | YNL193W | YPL247C | YNL193W | WD repeat-containing protein YPL247C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest. | Uncharacterized protein YNL193W; Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-scale analysis. | 0.559 |