node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADF1 | AUA1 | YCL058W-A | YFL010W-A | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | 0.760 |
ADF1 | BSC4 | YCL058W-A | YNL269W | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | Bypass of stop codon protein 4; Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment. | 0.602 |
ADF1 | VAM10 | YCL058W-A | YOR068C | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | 0.712 |
ADF1 | WWM1 | YCL058W-A | YFL010C | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1. | 0.693 |
ADF1 | YOL038C-A | YCL058W-A | YOL038C-A | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | Uncharacterized protein YOL038C-A; Putative protein of unknown function; identified by SAGE analysis. | 0.548 |
ALP1 | BSC4 | YNL270C | YNL269W | Basic amino-acid permease; Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication; Belongs to the amino acid-polyamine-organocation (APC) superfamily. YAT (TC 2.A.3.10) family. | Bypass of stop codon protein 4; Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment. | 0.514 |
ALP1 | YOL038C-A | YNL270C | YOL038C-A | Basic amino-acid permease; Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication; Belongs to the amino acid-polyamine-organocation (APC) superfamily. YAT (TC 2.A.3.10) family. | Uncharacterized protein YOL038C-A; Putative protein of unknown function; identified by SAGE analysis. | 0.692 |
AUA1 | ADF1 | YFL010W-A | YCL058W-A | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | 0.760 |
AUA1 | VAM10 | YFL010W-A | YOR068C | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | 0.756 |
AUA1 | WWM1 | YFL010W-A | YFL010C | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1. | 0.811 |
AUA1 | YOL038C-A | YFL010W-A | YOL038C-A | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | Uncharacterized protein YOL038C-A; Putative protein of unknown function; identified by SAGE analysis. | 0.553 |
BSC4 | ADF1 | YNL269W | YCL058W-A | Bypass of stop codon protein 4; Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment. | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | 0.602 |
BSC4 | ALP1 | YNL269W | YNL270C | Bypass of stop codon protein 4; Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment. | Basic amino-acid permease; Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication; Belongs to the amino acid-polyamine-organocation (APC) superfamily. YAT (TC 2.A.3.10) family. | 0.514 |
BSC4 | YOL038C-A | YNL269W | YOL038C-A | Bypass of stop codon protein 4; Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment. | Uncharacterized protein YOL038C-A; Putative protein of unknown function; identified by SAGE analysis. | 0.839 |
VAM10 | ADF1 | YOR068C | YCL058W-A | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | 0.712 |
VAM10 | AUA1 | YOR068C | YFL010W-A | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | 0.756 |
VAM10 | WWM1 | YOR068C | YFL010C | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1. | 0.608 |
VAM10 | YOL038C-A | YOR068C | YOL038C-A | Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering. | Uncharacterized protein YOL038C-A; Putative protein of unknown function; identified by SAGE analysis. | 0.528 |
WWM1 | ADF1 | YFL010C | YCL058W-A | WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1. | Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand. | 0.693 |
WWM1 | AUA1 | YFL010C | YFL010W-A | WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1. | Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease. | 0.811 |