STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900010755_01120Unannotated protein. (516 aa)    
Predicted Functional Partners:
GCA_900010755_01121
Unannotated protein.
 
  
 0.960
GCA_900010755_01114
Unannotated protein.
 
 0.909
GCA_900010755_01811
Unannotated protein.
  
   
 0.705
GCA_900010755_01881
Unannotated protein.
 
  
 0.649
GCA_900010755_01119
Unannotated protein.
       0.533
GCA_900010755_01124
Unannotated protein.
       0.488
GCA_900010755_01122
Unannotated protein.
       0.486
GCA_900010755_01123
Unannotated protein.
       0.486
GCA_900010755_02935
Unannotated protein.
 
  
 0.472
GCA_900010755_01125
Unannotated protein.
       0.468
Your Current Organism:
Paeniglutamicibacter antarcticus
NCBI taxonomy Id: 494023
Other names: Arthrobacter antarcticus, Arthrobacter antarcticus Pindi et al. 2010, Arthrobacter sp. SPC26, LMG 24542, LMG:24542, NCCB 100228, P. antarcticus, Paeniglutamicibacter antarcticus (Pindi et al. 2010) Busse 2016, strain SPC 26, strain SPC26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.