STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_59652Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.556
CHLM
Magnesium protoporphyrin ix methyltransferase, chloroplastic.
   
 0.556
A4A49_25796
Putative aarf domain-containing protein kinase, chloroplastic.
  
   
 0.548
A4A49_60164
Putative aarf domain-containing protein kinase, chloroplastic.
  
   
 0.547
A4A49_20336
Putative aarf domain-containing protein kinase, chloroplastic.
  
   
 0.545
PNSB1
Photosynthetic ndh subunit of subcomplex b 1, chloroplastic.
   
 
 0.519
A4A49_32867
Putative aarf domain-containing protein kinase, chloroplastic.
  
     0.506
A4A49_32786
Putative aarf domain-containing protein kinase, chloroplastic.
  
     0.503
A4A49_34488
Putative aarf domain-containing protein kinase, chloroplastic.
  
     0.503
A4A49_23985
Putative aarf domain-containing protein kinase, chloroplastic.
  
     0.495
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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