STRINGSTRING
XP_003678563.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003678563.1" - Hypothetical protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003678563.1Hypothetical protein (203 aa)    
Predicted Functional Partners:
XP_003679857.1
Hypothetical protein (760 aa)
     
  0.987
XP_003679901.1
Hypothetical protein (521 aa)
     
  0.975
XP_003682129.1
Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1471 aa)
     
  0.971
XP_003678634.1
Hypothetical protein (244 aa)
     
  0.971
XP_003679618.1
Hypothetical protein (1030 aa)
     
  0.970
XP_003680310.1
Hypothetical protein (479 aa)
     
  0.970
XP_003682990.1
Hypothetical protein (181 aa)
     
  0.860
XP_003679308.1
Hypothetical protein (832 aa)
       
  0.850
XP_003682511.1
Hypothetical protein (318 aa)
     
  0.812
XP_003680834.1
Hypothetical protein (343 aa)
     
  0.812
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora, Torulaspora delbrueckii
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