XP_003678654.1 protein (Torulaspora delbrueckii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

XP_003678654.1

Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family (149 aa)

Predicted Functional Partners:

XP_003681975.1

0.957

XP_003681692.1

0.945

XP_003679948.1

0.941

XP_003678903.1

0.936

XP_003679273.1

0.934

XP_003680208.1

0.934

XP_003678973.1

0.923

XP_003681301.1

0.919

XP_003682195.1

0.919

XP_003680977.1

0.913

Your Current Organism:

Torulaspora delbrueckii

NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

page 1 of 6

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2018

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
XP_003678654.1	XP_003678903.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	0.936
XP_003678654.1	XP_003678973.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae YML6 (YML025C); ancestral locus Anc_5.565	0.923
XP_003678654.1	XP_003679273.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae IMG1 (YCR046C); ancestral locus Anc_6.315	0.934
XP_003678654.1	XP_003679948.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP7 (YNL005C); ancestral locus Anc_1.410	0.941
XP_003678654.1	XP_003680208.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS16 (YPL013C); ancestral locus Anc_8.79	0.934
XP_003678654.1	XP_003680977.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL8 (YJL063C); ancestral locus Anc_1.313; Belongs to the bacterial ribosomal protein bL17 family	0.913
XP_003678654.1	XP_003681301.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117; Belongs to the universal ribosomal protein uS9 family	0.919
XP_003678654.1	XP_003681692.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS28 (YDR337W); ancestral locus Anc_5.389; Belongs to the universal ribosomal protein uS15 family	0.945
XP_003678654.1	XP_003681975.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MNP1 (YGL068W); ancestral locus Anc_6.213	0.957
XP_003678654.1	XP_003682195.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	Ribosomal protein; Similar to Saccharomyces cerevisiae YPL183W-A; ancestral locus Anc_6.178; Belongs to the bacterial ribosomal protein bL36 family	0.919
XP_003678903.1	XP_003678654.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70; Belongs to the universal ribosomal protein uL11 family	0.936
XP_003678903.1	XP_003678973.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae YML6 (YML025C); ancestral locus Anc_5.565	0.971
XP_003678903.1	XP_003679273.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae IMG1 (YCR046C); ancestral locus Anc_6.315	0.957
XP_003678903.1	XP_003679948.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP7 (YNL005C); ancestral locus Anc_1.410	0.967
XP_003678903.1	XP_003680208.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS16 (YPL013C); ancestral locus Anc_8.79	0.924
XP_003678903.1	XP_003680977.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL8 (YJL063C); ancestral locus Anc_1.313; Belongs to the bacterial ribosomal protein bL17 family	0.987
XP_003678903.1	XP_003681301.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117; Belongs to the universal ribosomal protein uS9 family	0.971
XP_003678903.1	XP_003681692.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS28 (YDR337W); ancestral locus Anc_5.389; Belongs to the universal ribosomal protein uS15 family	0.953
XP_003678903.1	XP_003681975.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Uncharacterized protein; Similar to Saccharomyces cerevisiae MNP1 (YGL068W); ancestral locus Anc_6.213	0.932
XP_003678903.1	XP_003682195.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496; Belongs to the universal ribosomal protein uL13 family	Ribosomal protein; Similar to Saccharomyces cerevisiae YPL183W-A; ancestral locus Anc_6.178; Belongs to the bacterial ribosomal protein bL36 family	0.921